Bee Ovary Analysis

<div>Fiji/ImageJ Macro written by Cameron J Nowell of Monash University (cameron.nowell@monash.edu)</div><div>Macro was developed using data from Sarah Aamidor of the university of Sydney based on original concepts developed by Chris Evenhuis of UTS</div><div><br></div><div>Macro will open CZI files and their respective ROIs and ask the user to confirm the correct zoom level</div><div><br></div><div>For macro to function it requires the following</div><div>- Images files must be Zeiss CZI confocal Z stacks</div><div>- ROI file containing regions for both nurse and oocyte cells </div><div>- ROIs must be labeled in the order string-ID-cell type (e.g. 1-1-o)</div><div>- ROI and CZI files must be named the same to pair the data together</div><div>- All data needs to be in a base folder containing a CZI folder and and ROI folder</div><div>- CZI files must be in the CZI folder</div><div>- ROI files must be in the ROI folder</div><div>- A Output folder needs to be created to save outline outputs to</div>