Data and script from: Temperature and pathogen exposure act independently to drive host phenotypic trajectories

Tobias Hector (2021)

Data: PTA_data.csv

Variables in data include -

pathogen = pathogen exposure treatment (levels = CTRL, C1, C14 & C20)
mat_temp = maternal temperature treatment (levels = 20 & 25 C)
acc_temp = focal temperature treatment (levels = 20 & 25 C)
size_at_mat = body size measurement at maturity (mm)
size_at_20 = body size measurement at age 20 days (mm)
size_first_clutch = number of offspring in the first clutch
size_second_clutch = number of offspring in the second clutch (not used in analysis)
total_clutches = total number of clutches produced
total_offspring = total count of offspring produced over lifetime
mean_clutch_size = mean clutch size
little_r = intrinsic rate of increase (r)
age_at_maturity = age of individuals on day of maturity
age_of_first_clutch = age of individuals on day of first clutch
Lifespan = lifespan
growth_rate = somatic growth rate

Scripts: 

PTA_multivariate_analysis_and_plotting.Rmd
Script containing the R code for producing the multivariate analysis and figures for the manuscript. See code for annotations

PTA_linear_models.Rmd
Script contains code for running univariate linear models on each phenotypic variable

PTA_univariate_plotting.Rmd
Script contains code for creating univariate phenotype figures (main text fig & supp fig)