Junction Analysis
Fiji/ImageJ macro for analysis cell tight junctions using TiJOR analys adapted from Terryn et al (2013) Cytometry Part A
Macro was developed by Cameron J Nowell of Monash University (cameron.nowell@monash.edu) in collaboration with Ami Mehta (ami.mehta@monash.edu).
Code will take Leica LIF files Analysis will extract the junction channel (assumed to be channel 3) and analyse
the TiJOR values
Requirements - Standard install of Fiji
Assumptions
- Data is in Leica LIF format
- Data is 3 channel
- Junction stain (e.g. VE-cadherin) is in the 3rd channel
