get_linear_pretty.py (1.99 kB)
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Extract linear plasmids from Unicycler assembly graphs

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posted on 04.10.2021, 07:09 authored by Jane HawkeyJane Hawkey
Python code used to identify putative linear plasmids based on their assembly structure from assembly graphs output by Unicycler (requires the first graph produced, 001_best_spades_graph.gfa). Uses Python 3.

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