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Finding Approximate Palindromes in Strings Quickly and Simply

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posted on 2022-08-29, 04:57 authored by L Allison
Described are two algorithms to find long approximate palindromes in a string, for example a DNA sequence. A simple algorithm requires O(n)- space and almost always runs in O(k.n)-time where n is the length of the string and k is the number of “errors” allowed in the palindrome. Its worst case time-complexity is O(n2

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Technical report number

2004/162

Year of publication

2004

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