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Raw reads paired-end RAD-seq data for Maccullochella peelii, Maccullochella macquariensis and Macquaria australasica

posted on 25.09.2017 by Alexandra Pavlova, Katherine Harrisson, Paul Sunnucks
Raw sequencing reads for 297 Murray cod (Maccullochella peelii; MC), 396 Macquarie perch (Macquarie australasia; MP) and 137 trout cod (Maccullochella macquariensis; TC) samples. Samples were individually barcoded using a 6 nucleotide (nt) sequence (provided in metadata files) and pooled into 11 libraries which were sequenced on an Illumina HiSeq 1500 sequencer (Illumina Inc., San Diego, CA, USA) using 100 bp paired-end reads. Seven libraries were resequenced (the rerun is indicated by "rr" in the library file name). Murray cod data are analysed in the study by Harrisson et al. "Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity." [Link to Dryad repository: doi:10.5061/dryad.57m0f].

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Australian Research Council Grant LP110200017, Icon Water (formerly ACTEW Water and ACTEW Corporation), Department of Sustainability and Environment (Victoria) (now within Department of Environment, Land, Water & Planning), Fisheries Victoria (now within Department of Economic Development, Jobs, Transport and Resources), Melbourne Water and Fisheries New South Wales