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Neo-sex chromosome-encoded mitochondrial genes in Eastern Yellow Robin lineages

Version 2 2024-08-11, 13:36
Version 1 2023-12-18, 01:23
dataset
posted on 2024-08-11, 13:36 authored by Alexandra PavlovaAlexandra Pavlova, Paul Sunnucks, Gabriel LowGabriel Low

This repository contains supplementary material and scripts for the manuscript:

Low GW, Pavlova A, Gan HM, Ko M-C, Sadanandan KR, Lee YP, Amos JN, Austin L, Falk S, Dowling D, Sunnucks P. 2024. Accelerated differentiation of neo-W nuclear-encoded mitochondrial genes between two climate-associated bird lineages signals potential co-evolution with mitogenomes. Heredity, accepted 6/08/2024.

DNA sequencing data is deposited to SRA under BioProject PRJNA1006346. The coastal eastern yellow robin genome is available via NCBI accession JAVTVJ000000000.

S1.Supplementary_Figures_and_Tables_10Aug24.docx and S2.Supplementary_Methods_10Aug24.docx -- supplementary figures, tables and methods

Coding Scripts and Additional File Descriptions for Low et al. 2024 Heredity.docx -- Explanation of the workflow, scripts and input files contained in this repository.


Funding

Australian Research Council grant DP180102359

Can mitochondrial and nuclear co-evolution drive climate adaptation? This project aims to reveal whether co-evolution between the mitochondrial genome of a wild bird and partner nuclear genes is causing the species to split into two forms, one adapted to inland environments and one to coastal conditions

Australian Research Council

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Australian Research Council grant DP210102275

Evolution and role of neo-sex chromosomes in mitonuclear co-evolution

Australian Research Council

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Australian Research Council LE150100035

A single molecule real-time DNA sequencing facility

Australian Research Council

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Holsworth Wildlife Research Endowment – Equity Trustees Charitable Foundation

Ecological Society of Australia

History